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An algorithm to extract physical characteristics of nematodes from microscopic images of plant roots

  • Universidad Peruana de Ciencias Aplicadas
  • Universidad Nacional Agraria La Molina

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

5 Scopus citations

Abstract

In Peru, phytoparasite nematodes are a type of specimen that adheres to vegetable roots, preventing plants from absorbing the necessary nutrients to grow. In order to apply contingency and prevention plans, it is necessary to study the families to which the nematode pests belong by analyzing their physical characteristics with a microscope. The proposed system represents an alternative to the current methods for the classification of phytoparasite nematodes through image processing. This system is an algorithm oriented to detect the physical characteristics of nematodes in tropical fruit crops (width and length). The algorithm involves image acquisition of nematodes through a microscope, obtain the luminance component of the image, illumination correction, binarization by histogram, objects segmentation, discrimination by area, surface detection and calculation of the Euclidean distance to approximate the physical characteristics of specimens in a sample of nematodes. Favorable results were obtained in the detection of the characteristics of the Meloidogyne type II species. The results were validated from those obtained by clinical analysis of the specialists, achieving up to 85% of success.

Original languageEnglish
Title of host publicationIEEE ICA-ACCA 2018 - IEEE International Conference on Automation/23rd Congress of the Chilean Association of Automatic Control
Subtitle of host publicationTowards an Industry 4.0 - Proceedings
EditorsCristian Duran-Faundez, Gaston Lefranc, Mario Fernandez-Fernandez, Carlos Munoz, Ernesto Rubio
PublisherInstitute of Electrical and Electronics Engineers Inc.
ISBN (Electronic)9781538655863
DOIs
StatePublished - 2 Jul 2018
EventIEEE International Conference on Automation/23rd Congress of the Chilean Association of Automatic Control: Towards an Industry 4.0, ICA-ACCA 2018 - Greater Concepcion, Chile
Duration: 17 Oct 201819 Oct 2018

Publication series

NameIEEE ICA-ACCA 2018 - IEEE International Conference on Automation/23rd Congress of the Chilean Association of Automatic Control: Towards an Industry 4.0 - Proceedings

Conference

ConferenceIEEE International Conference on Automation/23rd Congress of the Chilean Association of Automatic Control: Towards an Industry 4.0, ICA-ACCA 2018
Country/TerritoryChile
CityGreater Concepcion
Period17/10/1819/10/18

Keywords

  • Illumination correction
  • image processing
  • microscopic images
  • nematodes
  • plant roots

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